| 李雨欣，王 鹏，刘 雯，周 扬.海马齿 NHX 基因家族的鉴定及表达分析[J].广东农业科学,2023,50(10):85-96 |
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海马齿 NHX 基因家族的鉴定及表达分析 |
| Identification and Expression Analysis of NHX Gene Family of Sesuvium portulacastrum |
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| DOI：10.16768/j.issn.1004-874X.2023.10.010 |
| 中文关键词: 海马齿 盐胁迫 NHX 基因家族 基因鉴定 生物信息学分析 基因表达 |
| 英文关键词: Sesuvium portulacastrum salt stress NHX gene family gene identification bioinformatic analysis gene expression |
| 基金项目:海南省自然科学基金（318QN189）；海南省教育厅项目（Hnky2021-19，Qhys2021-248） |
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| 中文摘要: |
| 【目的】海马齿（Sesuvium portulacastrum L.）是典型的海岸植物和红树林伴生植物，能够固沙护岸，在海水中可以正常生长，具有极强的耐盐性。Na+/H+ 逆向转运蛋白（Na+/H+ exchange，NHX）在植物耐盐和生长发育中起关键作用，为了解 NHX 在海马齿耐盐过程中的作用，对海马齿 NHX 基因家族进行鉴定和分析。【方法】采用生物信息学方法从海马齿全长转录组数据中鉴定 NHXs 成员，对其蛋白理化性质、保守基序和进化关系进行分析，并利用荧光定量 PCR 技术研究盐胁迫下 NHXs 成员的表达模式。【结果】从海马齿中共鉴定出 12 个SpNHX 基因，命名为 SpNHX1~SpNHX12。SpNHXs 基因编码的氨基酸长度为 276~554 aa，分子量为 31.22~61.21 kD，等电点为 5.55~8.64，不稳定指数为 32.14~50.54，均为疏水性蛋白。系统发育分析表明，SpNHX 蛋白可分为 2 个亚组，同一亚组具有相似的保守基序。多序列比对结果发现，SpNHX 均具有 Na+/H+ exchange 保守结构域。转录组数据和荧光定量 PCR 结果显示，SpNHXs 基因在盐胁迫下均受到不同程度的诱导，其中 SpNHX1、SpNHX9、SpNHX10、SpNHX11 和 SpNHX12 在盐胁迫下显著上调表达。【结论】本研究明确了海马齿 NHX 基因家族在高盐胁迫下的表达模式，表明 SpNHX1、SpNHX9、SpNHX10、SpNHX11 和 SpNHX12 可能参与海马齿盐胁迫响应，为进一步研究 NHX 在海马齿耐盐过程中的作用提供理论基础。 |
| 英文摘要: |
| 【Objective】Sesuvium portulacastrum, a typical coastal and mangrove associate plant, is capable of retaining sand and protecting banks. It can grow normally in seawater and has a strong salt tolerance. Na+/H+ exchange (NHX) plays a key role in salt tolerance and plant growth with development. In order to understand the role of NHX in salt tolerance of S. portulacastrum, the NHX genes were identified and analyzed. 【Method】In this study, the S. portulacastrum NHX genes were identified by using informatic method through its full length transcriptome data. Their physicochemical properties, conserved motifs and evolutionary relationships were analyzed, and the expression patterns of NHX genes under s alt stress were studied by quantative real-time PCR (qRT-PCR).【Result】The results showed that 12 SpNHX genes were identified from S. portulacastrum and named as SpNHX1 to SpNHX12. The number of amino acids ranged from 276 to 554, with the molecular weight ranged from 31.22 to 61.21 kD, isoelectric point from 5.55 to 8.64, and instability ind ex from 32.14 to 50.54. All the proteins were hydrophobic. Phylogenetic analysis showed that SpNHX proteins can be divided into two subgroups. Similar conserved motifs composition was found in each subgroup. Multiple sequence alignment results showed that all SpNHX proteins had Na+/H+ exchange conserved domains. RNA-seq data and qRT-PCR results showed that SpNHX genes were induced to different degrees under salt stress, and SpNHX1, SpNHX9, SpNHX10, SpNHX11 and SpNHX12 were significantly up-regulated under salt stress. 【Conclusion】This study clarified the expression patterns of NHXs in S. portulacastrum under high salt stress, indicating that SpNHX1, SpNHX9, SpNHX10, SpNHX11 and SpNHX12 may be involved in the response of S. portulacastrum to salt stress, which provided a theoretical basis for further research on the role of NHX in the process of salt tolerance of S. portulacastrum. |
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